Office of the Vice President for Research

Monday Memo April 3, 2006

In this Issue

Vice President's Message
NYSTAR Visit
Good News and Coming Events
News
Events
Opportunities and Sponsor Information
Association for the Study of Higher Education (ASHE) Dissertation Fellowships
The Stony Brook University Chapter of Sigma Xi is Accepting Applications for Awards
Proposals with Diversity Components Should Contact the Center for Inclusive Education for Maximum Success
Upcoming Funding Opportunities
Interdisciplinary Seminars
Music for Meetings
Elimination of the Statutory Limitation on Payments to Consultants Under NSF Awards
Change in Time of Submission/Receipt of NIH Electronic Grant Applications to Grants.gov
Updated Instructions Regarding Inclusion of Publications as Appendix Materials
Essential Policies, Procedures and Resources
Rules and Regulation for RF Summer Employment Positions
New Faculty and Staff Digest Online
For More Information

Vice President's Message

NYSTAR Visit

Tomorrow and Wednesday our campus will be hosting two senior program officers from NYSTAR, the New York Office of Science, Technology and Academic Research, which manages most of the state’s science and technology-based economic development programs. One of the most impressive aspects of NYSTAR’s activity since its creation in 1999 has been its recognition and responsiveness, in collaboration with the Governor’s Office and the State Legislature, to the unfolding demands of its mission. In the last few months, at least two studies have been published on the general theme that research institutions’ role in economic development is technology transfer and a whole lot more, one by the National Academies and the other by a conference at the Industrial Performance Center at MIT. NYSTAR has not only already embraced that principle, it has developed a broad range of programs to maximize that diversity of potential contributions to the economy of the state. Its original, singular industry sector-focused program, the Centers for Advanced Technology, has grown through the addition of technology product commercialization, faculty recruitment, development and retention, support of matching requirements for major federal proposals, and support for science education.

This campus is fortunate to participate in several of these programs, including the CAT program (Stony Brook has one of the original seven CATs, the Center for Biotechnology, and a few years ago added a second, the Center for Advanced Sensor Systems); the Faculty Development Program, which currently supports Distinguished Professor Iwao Ojima, Chemistry and the Institute of Chemical Biology and Drug Development; the James D. Watson Young Investigator Program, which currently supports Professor Robert Rizzo, Applied Mathematics and Statistics; and the STAR Center program (the construction contract for Stony Brook’s STAR Center for Biomolecular Diagnostics and Therapeutics will be bid before the end of this year).

Although there was not room on their schedule on this visit for a general meeting with faculty, please let us know if you have questions about these programs, or any of the many other opportunities NYSTAR makes available to researchers whose work shows promise of scientific leadership and commercial potential, and we will get an answer or a contact for follow-up. Although legislation enacted last year calls for significant restructuring of the agency and some of its processes, and the addition of new programs, its mission will continue to recognize the fundamental importance of leading edge research to the state’s economic future and to provide appropriate incentives and support for institutions like ours to continue pursuing discovery and innovation.

Good News and Coming Events

News

Please join us in rejoicing with colleagues for achievements that have become known since the last issue.

Southampton Campus

Stony Brook and Long Island University reached a final agreement for SUNY to purchase Southampton Campus for $35 million. Stony Brook will operate the campus and plans to begin holding classes at the 82-acre site this September, with an initial focus on interdisciplinary upper-division undergraduate offerings on the environment and ecological sustainability.

Applied Mathematics and Statistics

The high-end computer graphics company NVIDIA has a Stony Brook success story article on the work of Robert Rizzo's research group. Using computational methods, Robert Rizzo's group is working to screen potential small molecule drugs for the HIV/AIDS virus. NVIDIA is helping the group through a very generous donation of five powerful stereo graphics cards which researchers use along with special infrared glasses for 3D stereo visualization. 'Seeing' in stereo or 3D helps researchers visualize how drugs interact with proteins at the atomic level in great detail. In 2005 Rizzo received a NYSTAR James D. Watson Investigator Award which is funding the research.

Materials Science and Engineering

Professor Devinder Mahajan has been selected as a member of the Russian Academy of Natural Sciences-US Section (RANS), and received a Certificate of Crown and Eagle Medal of Honor for contributions to “Petroleum Engineering.”

Aisha Bishop, a graduate student, received a National Science Foundation award to attend the 56th Lindau Meeting of Nobel Laureates and Students in Lindau, Germany. She joins a select group of American doctoral students, sponsored by the U.S. Department of Energy, National Institutes of Health and Oak Ridge Associated Universities, who will hear lectures and participate in less formal small group discussions with the Nobel Laureates, as well as fellow young researchers from around the world.

Anthropology

The cover story of the April issue of Smithsonian Magazine, "Leaping Lemurs! (and the Woman Who Loves Them" describes Professor Patricia Wright's twenty years working with lemurs and habitat conservation in Madagascar. Wright is a MacArthur Fellow and Director of the Institute for the Conservation of Tropical Environments.

Visiting Professor Richard Leakey and Meave Leakey are working with Stony Brook to build a research institute in the remote desert of Lake Turkana in northern Kenya. A short article in the March 3, 2006 Science tells of the venture and gives the Leakey's due credit for their 40 years of groundbreaking fossil discoveries. The goal is to build at least two year-round field facilities which would allow greater access to the area and establish an educational outreach program that would help to train and hire African postdoctoral researchers and graduate students.

Calverton Incubator

Incubator tenant M-1 Energy Partners was featured in a recent Newsday article on the company’s plans to develop a hybrid turbine-fuel cell technology to capture, store and control the release of tidal energy. The company, which has submitted an SBIR proposal to NSF, is working with faculty in Engineering and Marine Sciences.

Molecular Genetics and Microbiology

Sean Connolly, who received his Ph.D. in Molecular Genetics and Microbiology in June of 2004 at Stony Brook, has been selected to receive the Northeastern Association of Graduate Schools’ Doctoral Dissertation Award for 2005-2006. Connolly’s dissertation, advised by Jorge Benach, was entitled, “The Clearance of Relapsing Fever Spirochetemia is Mediated by Complement-Independent Bactericidal Antibodies.” Connolly is currently a postdoctoral fellow in Immunobiology at Yale.

Physics and Astronomy

Kathryn Krycka was one of two graduate students who work at the National Synchrotron Light Source (NSLS) to present research results at the annual meeting of the American Physical Society. On March 14 Krycka presented work she had done with NSLS scientist and interim chair Çhi-Chang Kao and Professor Sara Majetich, Carnegie Mellon, on cobalt-oxide nanoparticles, which will help further understanding of the magnetic properties of nanoparticle systems.

Undergraduate Research

Stony Brook has been chosen for a second time as a site for the Beckman Scholars Program, a prestigious undergraduate research award program which provides support for six undergraduates over the next three years. Stony Brook had previously received the Beckman Scholars Award in 1999. The 2006 proposal featured ten faculty: Robert Haltiwanger, Hermann Schindelin and Steve Smith, Biochemistry & Cell Biology; Nancy Goroff, Iwao Ojima, Daniel Raleigh, Carlos Simmerling and Peter Tonge, Chemistry; and Daniel Bogenhagen and Caroline Kisker, Pharmacology.

Events

Provost's Lecture Series

April 5: “Should the U.S. Withdraw from Iraq?”

Stan Goff, Veterans for Peace, is author of Full Spectrum Disorder, a first-person account of military maneuvers and an analysis of U.S. foreign policy. Seth Forman is Research Associate Professor and Deputy Director of the Center for Regional Policy Studies at Stony Brook University. 7:30 p.m. 
Student Activities Center Auditorium.


Wine Center


April 13: “What is Chardonnay?”


Gilles Martin, Martha Clara Vineyards
Chardonnay is known as the world's favorite white wine grape. But how can we discover its true nature? Join winemaker Martin in a guided tasting–paired with appropriate foods–of Chardonnay in its many guises, from sparkling to still, dry to sweet, fruity to oaky. Thursday, April 13 (Please note: Date Change) 
6:30–8:00 p.m., $55

To Register: Call Ginny Clancy at (631) 632-9404. Note: You must be 21 or over to participate in winetasting events. Reservations are required for all sessions.

July 5–July 29 Science and Research Awareness Series: "Topics in Cell and Molecular Biology as Related to Clinical Sciences"

Over the course of four weeks this lecture and workshop series is designed to bring awareness to enthusiastic students on different aspects of clinical sciences and modern cell and molecular biology. The topics to be presented will try to bridge the gap between basic and clinical sciences, introducing the aspect of translational and applied research as applied to human health and safety. Faculty members who are experts in their fields will assist in the educational program. A $500 minimum donation is suggested. For more information, a copy of the schedule and to download a registration form please go here:
http://anes.anesthes.sunysb.edu/teaching/sas.html

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Opportunities and Sponsor Information

Association for the Study of Higher Education (ASHE) Dissertation Fellowships

With support from Lumina Foundation for Education, ASHE has awarded 26 dissertation fellowships since 2003. This year, eight to ten dissertation fellowships in the amount of $14,000 each will be awarded for dissertations focusing on student access and success in education beyond high school. The Fellowship program also includes an array of activities designed to promote professional and academic development of Fellows through an intergenerational community of scholars. For more information and an application please visit:
http://www.ashe.ws/fellowship/aboutfellowship.htm
--Contributed by Peter Baigent, Vice President for Student Affairs and Associate Provost for Enrollment and Retention Management

The Stony Brook University chapter of Sigma Xi is pleased to announce that it is accepting applications for awards in:

Excellence in Research and Educationally-related Travel

No more than one nomination per laboratory will be accepted. The Award for Excellence in Research is presented annually to recognize highly qualified student research. For undergraduates, the award is noted on the student's transcript. An abstract of the research plus two letters of recommendation concerning the work are required, one from the student's advisor and one from a faculty member familiar with the student's research. The award includes election to membership in the Society and a one-year waiver of dues. Application forms are attached and are available in the offices listed below.

The Travel Award is to defray travel expenses to professional meetings. The award can be for a past or future meeting. The prizes will vary, but could be as much as $250. A travel budget must be submitted, along with a brief justification of the value of the student's attendance at the meeting, as well as two letters of recommendation, one from the student's advisor and one from a faculty member familiar with the student's research.

Deadline/Submission
Completed application forms should be submitted by April 12, 2006 to one of the following chapter officers (email submissions will not be accepted):

Dr. Nicholas Delihas, Department of Microbiology, 158 Life Sciences Bldg., Z=5222 Dr. Harvard Lyman, Department of Biochemistry, 472 Life Sciences Bldg., Z=5215 Dr. R. Lawrence Swanson, Marine Sciences Research Ctr., 147 Dutchess Hall, Z=5000 Dr. Alan Tucker, Department of Applied Math and Statistics, P138 Math. Bldg., Z=3600

Kindly disseminate this information in your area and inform your students.

--Contributed by The Stony Brook University chapter of Sigma Xi

Proposals with Diversity Components for Graduate Education Should Contact the Center for Inclusive Education to Maximize the Success of the Proposal

If you are considering writing a proposal to a Federal Agency or a Foundation that requires a diversity component for graduate education please contact Lucy Gluck as early as possible so that she can provide you with the data and information that you need to make the strongest possible proposal. Lucy can be contacted on Notes (Lucy Gluck) or by phone (632 9988).

The Center for Inclusive Education is now in a position to provide support and technical assistance in preparing proposals that have a graduate diversity component to them. Lucy Gluck has worked with David Ferguson for many years and is a skilled writer and proposal developer. Lucy will have at her disposal all of the facts and figures on enrollment and degree production by ethnicity. She knows about all of the successful diversity efforts underway on campus and can supply appropriate prose describing these for your proposal. All training grants, most Center grants and many other types of awards now require a well developed diversity program as part of the proposal. Martin Schoonen recently lead a team who won the first NSF IGERT award to Stony Brook ($2.9M for graduate student support) and worked with Lucy. As you may know, Stony Brook in the lead institution for the NSF SUNY LS-AMP program and for the NSF SUNY AGEP program and Lucy has been much involved in both of these.

--Contributed by Lawrence B. Martin, Dean of the Graduate School, Associate Provost for Analysis and Planning

Upcoming Funding Opportunities

For a complete list of upcoming deadlines, please go to -
http://www.stonybrook.edu/research/fndopp/deadlcal.html

Interdisciplinary Seminars

Please remember that, in an effort to encourage interdisciplinary research on campus, this office will supply $100 toward a speaker's luncheon when your department invites a Stony Brook colleague from an unrelated discipline to give a seminar. Please contact Ann-Marie Scheidt amscheidt@notes.cc.sunysb.edu to determine eligibility. You will be asked to provide a copy of the seminar notice annotated with the number of attendees and a brief description of any anticipated collaborations with the speaker's department.

Music for Meetings

Please remember that the OVPR would like to assist those of you who are planning a research meeting on campus by providing musical interludes. If you would like to have Stony Brook student musicians play at the reception for your meeting it can be arranged by contacting Ann-Marie Scheidt amscheidt@notes.cc.sunysb.edu. OVPR will make a payment to the Department of Music and the Department in turn pays the students. You get to listen to some nice music.

Elimination of the Statutory Limitation on Payments to Consultants under NSF Awards

In previous years, Acts making appropriations to the Foundation limited the maximum rate of compensation paid to consultants (whether retained by the Federal Government or by a grantee). The Appropriation Act applicable to NSF for Fiscal Year (FY) 2006 does not contain a limitation on payments to consultants under NSF awards and therefore, this constraint has been eliminated for FY 2006 appropriated funds. Prior fiscal year funds are still subject to the consultant pay limitation.

In order to implement this change, NSF plans to have the Federal Demonstration Partnership Operating Procedures, Appendix B, National Policy Requirements Matrix, modified to delete the relevant statutory citation. Costs of consultants, including those who are members of a particular profession or possess a special skill and who are not officers or employees of the performing organization, are allowable when reasonable in relation to the services rendered. Even though the limitation on consultant payments has now been eliminated, payments should be comparable to the normal or customary fees charged and received by the consultant for comparable services, especially on non-government contracts and grants. Further information on the allowability of consultant services costs can be found in the NSF Grant Policy Manual Section 616 Frequently Asked Questions (FAQs) regarding this change-
http://www.nsf.gov/publications/pub_summ.jsp?ods_key=gpm
as well as a listing of prior archived rates, are available on the Policy Office website at-
http://www.nsf.gov/bfa/dias/policy/
Questions concerning the application of the rate to NSF awards should be directed to the Policy Office, Division of Institution and Award Support at (703) 292-8243 or via e-mail at policy@nsf.gov.

--Contributed by Jean Feldman, Head, Policy Office, Division of Institution and Award Support, NSF

Change in Time of Submission/Receipt of NIH Electronic Grant Applications to Grants.gov

The purpose of this Notice is to inform applicants of a change in the time that electronic grant applications must be successfully received by Grants.gov ( http://www.grants.gov/) in order to be considered “on time.” Effective April 1, 2006, applications must be received no later than 5:00 p.m. local time (of the applicant institution/organization) on the submission date(s) described in a funding opportunity announcement. Please note that the Grants.gov timestamp will continue to be expressed in Eastern Time.

The rationale to use a 5:00 p.m. local time deadline takes into consideration a number of factors, including spreading the workload during peak submission times, creating a more equitable playing field for applicant institutions/organizations in different regions of the country, aligning NIH business processes with those of other Federal agencies, and requests from applicant institutions/organizations.

This change applies to ALL electronic grant applications submitted to NIH through Grants.gov, including those that have already changed to electronic submission by April 1, 2006 (R13, R15, R36, S10, SBIR R43/R44, and STTR R41/R42) and those that are scheduled to do so in the future (e.g., R03, R21, R33, R21/R33, and R34 for the June 1, 2006 submission date). Thus, it does not apply to S10 applications due March 22, 2006 but does apply to SBIR and STTR applications due April 1, 2006. The timeline for the transition of all competing grant mechanisms is available at:
http://era.nih.gov/ElectronicReceipt/strategy_timeline.htm.
Please note that the following offices continue to be available for assistance in the electronic submission of grant applications to NIH through Grants.gov:

Inquiries regarding this Notice should be directed to:
GrantsInfo
Office of Extramural Research
National Institutes of Health
Phone: 301-435-0714
TTY: 301-451-0088
Email: grantsinfo@nih.gov

Updated Instructions Regarding Inclusion of Publications as Appendix Materials
The purpose of this Notice is to inform applicants of a change in the approach and policy regarding the inclusion of publications as Appendix materials in NIH grant applications. This policy applies to all grant mechanisms for which publications are acceptable Appendix material, regardless of which application form is used (e.g., PHS 398, SF424 (R&R), PHS 416-1) or the mode of submission (paper or electronic). Effective for applications intended for the May 10, 2006 submission date, the NIH standard policy regarding the inclusion of publications as acceptable Appendix material in grant applications is described below.

Publications, manuscripts ( accepted for publication), abstracts, patents, or other printed materials directly relevant to the proposed project. Do not include manuscripts submitted for publication.  Applicants should refer to instruction guides and specific Funding Opportunity Announcements (FOAs) to determine the appropriate limit on the number of publications that may be submitted for a particular program. Note that not all grant mechanisms allow the inclusion of publications.

Publications in press:   Include only a publication list with a link to the on-line journal article or the NIH PubMed Central (PMC) submission identification number. Do not include the entire article. 

Manuscripts accepted for publication but not yet published: The entire article may be submitted electronically as a PDF attachment.

Manuscripts published but an online journal link is not available: The entire article may be submitted electronically as a PDF attachment. Note at this time no changes are being made to the other Appendix components: Surveys, questionnaires, data collection instruments, clinical protocols, and informed consent documents.

No images may be included in the Appendix that are not also represented within Items 2-5 of the Research Plan. Applicants are cautioned not to use the Appendix to circumvent the page limitations of the Research Plan. An application that does not observe the relevant policies and procedures may be delayed in the review process. Applicants are reminded to review specific FOAs for any additional program-specific guidance on Appendix material and other application requirements. Application instructions for the PHS 398, SF424 (R&R), and PHS 416-1 will be revised to reflect this new policy for inclusion of publications in Appendix.

The purpose of this Notice is to inform applicants of a change in the approach and policy regarding the inclusion of publications as Appendix materials in NIH grant applications. This policy applies to all grant mechanisms for which publications are acceptable Appendix material, regardless of which application form is used (e.g., PHS 398, SF424 (R&R), PHS 416-1) or the mode of submission (paper or electronic). Effective for applications intended for the May 10, 2006 submission date, the NIH standard policy regarding the inclusion of publications as acceptable Appendix material in grant applications is described below.

Publications, manuscripts ( accepted for publication), abstracts, patents, or other printed materials directly relevant to the proposed project. Do not include manuscripts submitted for publication.  Applicants should refer to instruction guides and specific Funding Opportunity Announcements (FOAs) to determine the appropriate limit on the number of publications that may be submitted for a particular program. Note that not all grant mechanisms allow the inclusion of publications.

Publications in press:   Include only a publication list with a link to the on-line journal article or the NIH PubMed Central (PMC) submission identification number. Do not include the entire article. 

Manuscripts accepted for publication but not yet published: The entire article may be submitted electronically as a PDF attachment.

  • Manuscripts published but an online journal link is not available:
  • The entire article may be submitted electronically as a PDF attachment.
  • Note at this time no changes are being made to the other Appendix components:
  • Surveys, questionnaires, data collection instruments, clinical protocols, and informed consent documents.

No images may be included in the Appendix that are not also represented within Items 2-5 of the Research Plan. Applicants are cautioned not to use the Appendix to circumvent the page limitations of the Research Plan. An application that does not observe the relevant policies and procedures may be delayed in the review process. Applicants are reminded to review specific FOAs for any additional program-specific guidance on Appendix material and other application requirements. Application instructions for the PHS 398, SF424 (R&R), and PHS 416-1 will be revised to reflect this new policy for inclusion of publications in Appendix materials.

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Essential Policies, Procedures and Resources

Rules and Regulation for RF Summer Employment Positions

Vital Research Foundation rules and regulations regarding the temporary summer employment of RF faculty and project aids in any capacity may be viewed online at the HR Website at:
http://naples.cc.sunysb.edu/Admin/HRS.nsf/pages/HRS_Focus_SummerEmployment

Summer salary info for 9 month faculty is included in a link here.

The official begin date for summer employment Is May 22. These regulations may directly affect your ability to hire and retain RF Faculty, Project Aides, undergrads and graduate students over the summer semester. Please check through all of the appropriate rules and regulations concerning this.

--Contributed by Rick Sadetsky (richard.sadetsky@stonybrook.edu), Human Resource Services

New Faculty and Staff Digest Online

How do you learn quickly to navigate Stony Brook Campus? ... Set up e-mail accounts, find out where to eat, enroll in Direct Deposit, locate child care, volunteer opportunities, traditions, banking services, recreation and entertainment - even train schedules? Where can Faculty find policies and procedures for appointments, tenure and promotion; research and scholarly activity; examinations and grading?

The Faculty & Staff Digest at http://www.stonybrook.edu/digest is the 'Insider's Guide' that enables you to connect with our virtual and expanding Campus community with links to dynamic Web pages listing most services, departments, and organizations. The very "user friendly" Search function immediately brings you to the topic of interest. The Editors welcome suggestions, via the Comments section, so be sure to recommend additional sites that you think will benefit your colleagues.

--Contributed by Margaret Tumolwiczs. DoIT

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For More Information

An abundance of specific information for the research community is available on our Website, where past issues of this bulletin can also be found.

Office of the Vice President for Research - http://www.stonybrook.edu/research/

Monday Memo archive - http://www.stonybrook.edu/research/monmemo/mmarchive.html

All past issues of Monday Memo are keyword searchable.

And if you are challenged by the embarrassment of riches in the over 2,000 individual Web pages that comprise the Website, you may find the alphabetical site index helpful. The index can be accessed at
http://www.stonybrook.edu/research/sitemap.html.

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